Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 EEF1DP3-203ENST00000566025 782 ntBASIC20.33■□□□□ 0.85
PRAMEF4O60810 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PRAMEF4O60810 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.33■□□□□ 0.84
PRAMEF4O60810 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PRAMEF4O60810 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PRAMEF4O60810 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF4O60810 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.33■□□□□ 0.84
PRAMEF4O60810 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.33■□□□□ 0.84
PRAMEF4O60810 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF4O60810 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF4O60810 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEF4O60810 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.32■□□□□ 0.84
PRAMEF4O60810 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEF4O60810 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEF4O60810 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PRAMEF4O60810 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF4O60810 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PRAMEF4O60810 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRAMEF4O60810 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF4O60810 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.31■□□□□ 0.84
PRAMEF4O60810 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.31■□□□□ 0.84
PRAMEF4O60810 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.31■□□□□ 0.84
PRAMEF4O60810 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF4O60810 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF4O60810 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRAMEF4O60810 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF4O60810 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRAMEF4O60810 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 AL049796.1-201ENST00000565336 1766 ntBASIC20.29■□□□□ 0.84
PRAMEF4O60810 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF4O60810 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 AC053503.5-201ENST00000601508 636 ntBASIC20.29■□□□□ 0.84
PRAMEF4O60810 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF4O60810 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF4O60810 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF4O60810 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF4O60810 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF4O60810 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEF4O60810 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.28■□□□□ 0.84
PRAMEF4O60810 TERF1P2-201ENST00000583350 1212 ntBASIC20.28■□□□□ 0.84
PRAMEF4O60810 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PRAMEF4O60810 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF4O60810 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF4O60810 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF4O60810 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF4O60810 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF4O60810 LINC02228-203ENST00000641970 1355 ntBASIC20.27■□□□□ 0.84
PRAMEF4O60810 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF4O60810 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PRAMEF4O60810 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEF4O60810 AC123595.1-201ENST00000440769 1046 ntBASIC20.27■□□□□ 0.84
PRAMEF4O60810 YBX1P1-201ENST00000445822 960 ntBASIC20.27■□□□□ 0.84
PRAMEF4O60810 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF4O60810 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRAMEF4O60810 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRAMEF4O60810 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PRAMEF4O60810 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms