Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 AF213884.3-201ENST00000563833 479 ntBASIC19.15■□□□□ 0.66
RNF13O43567 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF13O43567 AL139246.5-201ENST00000606645 996 ntBASIC19.15■□□□□ 0.66
RNF13O43567 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF13O43567 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 RASA4CP-201ENST00000424092 1398 ntBASIC19.15■□□□□ 0.66
RNF13O43567 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF13O43567 AF106564.1-201ENST00000607058 2553 ntBASIC19.15■□□□□ 0.66
RNF13O43567 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF13O43567 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF13O43567 MIR939-201ENST00000401314 82 ntBASIC19.14■□□□□ 0.65
RNF13O43567 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF13O43567 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF13O43567 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF13O43567 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RNF13O43567 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF13O43567 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF13O43567 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF13O43567 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF13O43567 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF13O43567 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF13O43567 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 AC091305.1-201ENST00000479476 895 ntBASIC19.13■□□□□ 0.65
RNF13O43567 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 AC105233.4-201ENST00000642045 216 ntBASIC19.13■□□□□ 0.65
RNF13O43567 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF13O43567 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF13O43567 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF13O43567 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF13O43567 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF13O43567 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF13O43567 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF13O43567 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF13O43567 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RNF13O43567 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF13O43567 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF13O43567 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF13O43567 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF13O43567 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RNF13O43567 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
RNF13O43567 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF13O43567 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF13O43567 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF13O43567 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF13O43567 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF13O43567 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 AP006587.3-201ENST00000525742 1516 ntBASIC19.11■□□□□ 0.65
RNF13O43567 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF13O43567 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF13O43567 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF13O43567 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
RNF13O43567 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.11■□□□□ 0.65
RNF13O43567 AL136967.2-201ENST00000623968 743 ntBASIC19.11■□□□□ 0.65
RNF13O43567 AC003102.1-202ENST00000563394 1796 ntBASIC19.11■□□□□ 0.65
RNF13O43567 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF13O43567 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF13O43567 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF13O43567 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF13O43567 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF13O43567 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF13O43567 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF13O43567 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms