Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH17O14917 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 PKD1P6-201ENST00000343738 4769 ntBASIC20.09■□□□□ 0.81
PCDH17O14917 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH17O14917 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 AC004911.1-201ENST00000416316 871 ntBASIC20.09■□□□□ 0.81
PCDH17O14917 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH17O14917 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH17O14917 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDH17O14917 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH17O14917 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDH17O14917 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH17O14917 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH17O14917 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH17O14917 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH17O14917 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH17O14917 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH17O14917 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH17O14917 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH17O14917 AP004607.7-201ENST00000527152 1677 ntBASIC20.08■□□□□ 0.81
PCDH17O14917 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDH17O14917 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH17O14917 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH17O14917 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH17O14917 AC016769.1-201ENST00000409132 1010 ntBASIC20.08■□□□□ 0.81
PCDH17O14917 AC006015.1-201ENST00000429970 570 ntBASIC20.08■□□□□ 0.81
PCDH17O14917 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH17O14917 AC137761.2-201ENST00000561729 223 ntBASIC20.08■□□□□ 0.81
PCDH17O14917 AC145350.3-201ENST00000569033 163 ntBASIC20.08■□□□□ 0.81
PCDH17O14917 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH17O14917 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDH17O14917 AC004854.2-201ENST00000608450 1441 ntBASIC20.08■□□□□ 0.8
PCDH17O14917 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH17O14917 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH17O14917 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH17O14917 AC055733.4-201ENST00000638462 1354 ntBASIC20.08■□□□□ 0.8
PCDH17O14917 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH17O14917 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH17O14917 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH17O14917 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDH17O14917 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDH17O14917 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDH17O14917 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH17O14917 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH17O14917 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PCDH17O14917 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDH17O14917 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDH17O14917 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH17O14917 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDH17O14917 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDH17O14917 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDH17O14917 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDH17O14917 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH17O14917 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH17O14917 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDH17O14917 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH17O14917 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH17O14917 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH17O14917 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDH17O14917 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDH17O14917 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDH17O14917 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDH17O14917 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH17O14917 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH17O14917 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH17O14917 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH17O14917 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH17O14917 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH17O14917 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDH17O14917 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDH17O14917 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDH17O14917 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms