Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM38O00635 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRIM38O00635 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM38O00635 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM38O00635 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
TRIM38O00635 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM38O00635 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM38O00635 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM38O00635 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM38O00635 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM38O00635 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM38O00635 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TRIM38O00635 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 NCF1B-203ENST00000435988 1254 ntBASIC21.16■□□□□ 0.98
TRIM38O00635 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.16■□□□□ 0.98
TRIM38O00635 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM38O00635 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM38O00635 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TRIM38O00635 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM38O00635 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM38O00635 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM38O00635 SLC25A24-204ENST00000569674 2357 ntBASIC21.15■□□□□ 0.98
TRIM38O00635 AC026310.3-201ENST00000625186 2373 ntBASIC21.15■□□□□ 0.98
TRIM38O00635 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM38O00635 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM38O00635 MIR663A-201ENST00000385250 93 ntBASIC21.15■□□□□ 0.98
TRIM38O00635 AL355802.2-201ENST00000402069 882 ntBASIC21.15■□□□□ 0.98
TRIM38O00635 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM38O00635 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.15■□□□□ 0.98
TRIM38O00635 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM38O00635 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRIM38O00635 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM38O00635 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM38O00635 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM38O00635 AC005224.4-201ENST00000583262 1652 ntBASIC21.15■□□□□ 0.98
TRIM38O00635 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM38O00635 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM38O00635 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM38O00635 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM38O00635 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM38O00635 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM38O00635 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM38O00635 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TRIM38O00635 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM38O00635 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM38O00635 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM38O00635 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM38O00635 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM38O00635 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM38O00635 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIM38O00635 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM38O00635 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM38O00635 MFSD11-216ENST00000590393 1141 ntBASIC21.13■□□□□ 0.97
TRIM38O00635 AC104187.1-201ENST00000607510 612 ntBASIC21.13■□□□□ 0.97
TRIM38O00635 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.13■□□□□ 0.97
TRIM38O00635 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM38O00635 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIM38O00635 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM38O00635 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM38O00635 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM38O00635 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM38O00635 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM38O00635 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM38O00635 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM38O00635 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM38O00635 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM38O00635 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM38O00635 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM38O00635 AC087742.1-201ENST00000575880 1738 ntBASIC21.12■□□□□ 0.97
TRIM38O00635 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
TRIM38O00635 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 KRT87P-202ENST00000534226 1464 ntBASIC21.11■□□□□ 0.97
TRIM38O00635 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM38O00635 AC009237.3-201ENST00000393279 1427 ntBASIC21.11■□□□□ 0.97
TRIM38O00635 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM38O00635 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM38O00635 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM38O00635 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM38O00635 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM38O00635 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms