Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00473A8K010 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC00473A8K010 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00473A8K010 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00473A8K010 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.17■□□□□ 0.34
LINC00473A8K010 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00473A8K010 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00473A8K010 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00473A8K010 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LINC00473A8K010 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC00473A8K010 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00473A8K010 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.16■□□□□ 0.34
LINC00473A8K010 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC00473A8K010 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LINC00473A8K010 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC00473A8K010 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LINC00473A8K010 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LINC00473A8K010 AC073130.3-201ENST00000624389 2278 ntBASIC17.16■□□□□ 0.34
LINC00473A8K010 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC00473A8K010 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINC00473A8K010 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC00473A8K010 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00473A8K010 AC099791.1-201ENST00000416440 715 ntBASIC17.15■□□□□ 0.34
LINC00473A8K010 AC096631.2-201ENST00000436136 790 ntBASIC17.15■□□□□ 0.34
LINC00473A8K010 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00473A8K010 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC00473A8K010 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC00473A8K010 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LINC00473A8K010 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00473A8K010 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINC00473A8K010 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC00473A8K010 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00473A8K010 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00473A8K010 AC008406.3-201ENST00000620001 1374 ntBASIC17.15■□□□□ 0.34
LINC00473A8K010 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00473A8K010 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00473A8K010 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00473A8K010 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LINC00473A8K010 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00473A8K010 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00473A8K010 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LINC00473A8K010 AC009237.3-201ENST00000393279 1427 ntBASIC17.13■□□□□ 0.33
LINC00473A8K010 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LINC00473A8K010 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00473A8K010 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC00473A8K010 PBX2P1-201ENST00000493219 1291 ntBASIC17.13■□□□□ 0.33
LINC00473A8K010 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00473A8K010 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LINC00473A8K010 TSPY26P-201ENST00000476365 1326 ntBASIC17.13■□□□□ 0.33
LINC00473A8K010 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00473A8K010 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 AC055733.4-201ENST00000638462 1354 ntBASIC17.13■□□□□ 0.33
LINC00473A8K010 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00473A8K010 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
LINC00473A8K010 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LINC00473A8K010 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC00473A8K010 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.12■□□□□ 0.33
LINC00473A8K010 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00473A8K010 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.12■□□□□ 0.33
LINC00473A8K010 AC027682.1-201ENST00000562846 899 ntBASIC17.12■□□□□ 0.33
LINC00473A8K010 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00473A8K010 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.12■□□□□ 0.33
LINC00473A8K010 AC105233.4-201ENST00000642045 216 ntBASIC17.12■□□□□ 0.33
LINC00473A8K010 SLC25A24-204ENST00000569674 2357 ntBASIC17.12■□□□□ 0.33
LINC00473A8K010 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00473A8K010 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00473A8K010 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms