Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF25A6NGN4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 MIR935-201ENST00000401179 91 ntBASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 YBX1P1-201ENST00000445822 960 ntBASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF25A6NGN4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRAMEF25A6NGN4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
PRAMEF25A6NGN4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF25A6NGN4 BX005040.4-201ENST00000637145 1518 ntBASIC19.76■□□□□ 0.75
PRAMEF25A6NGN4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF25A6NGN4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF25A6NGN4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
PRAMEF25A6NGN4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF25A6NGN4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PRAMEF25A6NGN4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 RARRES2P6-201ENST00000567333 442 ntBASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF25A6NGN4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 AC123595.1-201ENST00000440769 1046 ntBASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 AL034346.1-201ENST00000568244 1277 ntBASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 AC104564.3-201ENST00000582367 638 ntBASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF25A6NGN4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 AP004607.7-201ENST00000527152 1677 ntBASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF25A6NGN4 LINC02228-203ENST00000641970 1355 ntBASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 AC097381.1-201ENST00000429019 1296 ntBASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 MIR6821-201ENST00000617625 74 ntBASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PRAMEF25A6NGN4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms