Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 AL034346.1-201ENST00000568244 1277 ntBASIC20.38■□□□□ 0.85
CNOT1A5YKK6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 TSPY15P-201ENST00000457163 923 ntBASIC20.38■□□□□ 0.85
CNOT1A5YKK6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 AC145676.1-201ENST00000514988 2004 ntBASIC20.38■□□□□ 0.85
CNOT1A5YKK6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 AL353708.3-201ENST00000610272 989 ntBASIC20.37■□□□□ 0.85
CNOT1A5YKK6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 SOX15-203ENST00000570788 1093 ntBASIC20.37■□□□□ 0.85
CNOT1A5YKK6 RN7SL471P-201ENST00000580476 299 ntBASIC20.37■□□□□ 0.85
CNOT1A5YKK6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT1A5YKK6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 RPS2P55-201ENST00000397318 883 ntBASIC20.36■□□□□ 0.85
CNOT1A5YKK6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 AC107956.1-201ENST00000494359 873 ntBASIC20.36■□□□□ 0.85
CNOT1A5YKK6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 AP001412.1-201ENST00000608405 714 ntBASIC20.36■□□□□ 0.85
CNOT1A5YKK6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CNOT1A5YKK6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 AP006587.3-201ENST00000525742 1516 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 AC004812.2-201ENST00000611079 2094 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 AC138932.3-201ENST00000567634 1902 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 OR7E47P-201ENST00000546390 1422 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 AC008175.2-201ENST00000612840 297 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 HLA-B-256ENST00000639848 1089 ntBASIC20.35■□□□□ 0.85
CNOT1A5YKK6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CNOT1A5YKK6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.34■□□□□ 0.85
CNOT1A5YKK6 MTDHP1-201ENST00000605323 784 ntBASIC20.34■□□□□ 0.85
CNOT1A5YKK6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 AC243732.1-201ENST00000612648 864 ntBASIC20.34■□□□□ 0.85
CNOT1A5YKK6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 AC133681.1-201ENST00000465482 601 ntBASIC20.34■□□□□ 0.85
CNOT1A5YKK6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT1A5YKK6 CD177P1-201ENST00000606252 935 ntBASIC20.34■□□□□ 0.85
CNOT1A5YKK6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms