Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF103-CHMP3A0A140T963 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 AC011298.3-201ENST00000615796 283 ntBASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RNF103-CHMP3A0A140T963 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF103-CHMP3A0A140T963 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RNF103-CHMP3A0A140T963 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF103-CHMP3A0A140T963 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 OXCT2P1-201ENST00000447263 1535 ntBASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 AL136116.3-201ENST00000402907 1138 ntBASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 SLC47A1P1-202ENST00000449666 945 ntBASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF103-CHMP3A0A140T963 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF103-CHMP3A0A140T963 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 AC026471.6-201ENST00000622954 1905 ntBASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms