Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC163A0A0D9SF12 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC163A0A0D9SF12 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 CYP2T3P-201ENST00000601990 817 ntBASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC163A0A0D9SF12 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC163A0A0D9SF12 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 KRT17P1-201ENST00000399211 1546 ntBASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 MIR4497-201ENST00000583208 89 ntBASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC163A0A0D9SF12 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 CDV3P1-201ENST00000471403 739 ntBASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 AC061975.6-201ENST00000579045 1553 ntBASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21■□□□□ 0.95
CCDC163A0A0D9SF12 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 KRT17P3-201ENST00000420566 1262 ntBASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 RPPH1-201ENST00000516869 333 ntBASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 AL589743.5-201ENST00000616611 1050 ntBASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 AC137767.1-201ENST00000602918 1920 ntBASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC163A0A0D9SF12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 AC091799.1-201ENST00000422823 811 ntBASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 AC073912.3-201ENST00000624414 853 ntBASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC163A0A0D9SF12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms