Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 GCSHP5-201ENST00000443090 522 ntBASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 AC097658.1-201ENST00000475555 843 ntBASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCN10AQ9Y5Y9 AC093323.1-202ENST00000635031 2045 ntBASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 KRT18P29-201ENST00000397031 1267 ntBASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.4■■□□□ 1.34
SCN10AQ9Y5Y9 AC003102.1-202ENST00000563394 1796 ntBASIC23.39■■□□□ 1.34
SCN10AQ9Y5Y9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
SCN10AQ9Y5Y9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.39■■□□□ 1.34
SCN10AQ9Y5Y9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCN10AQ9Y5Y9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCN10AQ9Y5Y9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SCN10AQ9Y5Y9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
SCN10AQ9Y5Y9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCN10AQ9Y5Y9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.36■■□□□ 1.33
SCN10AQ9Y5Y9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCN10AQ9Y5Y9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms