Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 AC079140.4-201ENST00000507448 529 ntBASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 RAP2CP1-201ENST00000605103 478 ntBASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB11Q9Y5F2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
PCDHB11Q9Y5F2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHB11Q9Y5F2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHB11Q9Y5F2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 KRT18P61-201ENST00000585825 1298 ntBASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 AC005224.4-201ENST00000583262 1652 ntBASIC20.7■□□□□ 0.9
PCDHB11Q9Y5F2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 AL109923.1-201ENST00000618799 583 ntBASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB11Q9Y5F2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 AC104771.1-201ENST00000603335 964 ntBASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 AC007375.3-201ENST00000600936 2314 ntBASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHB11Q9Y5F2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 AL355802.2-201ENST00000402069 882 ntBASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB11Q9Y5F2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 AP006587.3-201ENST00000525742 1516 ntBASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms