Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 OR7E47P-201ENST00000546390 1422 ntBASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.24■□□□□ 0.35
RCL1Q9Y2P8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 AP005212.1-201ENST00000581547 1997 ntBASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 MIR4508-201ENST00000584178 70 ntBASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RCL1Q9Y2P8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 AC137630.3-201ENST00000607245 391 ntBASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 AL031602.1-201ENST00000633169 911 ntBASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RCL1Q9Y2P8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 AL499627.2-201ENST00000606283 725 ntBASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RCL1Q9Y2P8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RCL1Q9Y2P8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.2■□□□□ 0.34
RCL1Q9Y2P8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms