Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 RARRES2P2-201ENST00000394842 485 ntBASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 OXCT2P1-201ENST00000447263 1535 ntBASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERGIC3Q9Y282 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 AFG3L1P-217ENST00000557444 2447 ntBASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERGIC3Q9Y282 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERGIC3Q9Y282 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ERGIC3Q9Y282 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 MIR6722-201ENST00000617286 78 ntBASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms