Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 AC073314.1-201ENST00000568729 2216 ntBASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
COMMD3Q9UBI1 AC087289.5-201ENST00000586076 3175 ntBASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COMMD3Q9UBI1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3Q9UBI1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3Q9UBI1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3Q9UBI1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.52■□□□□ 0.56
COMMD3Q9UBI1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD3Q9UBI1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms