Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN1Q9P244 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN1Q9P244 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LRFN1Q9P244 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN1Q9P244 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LRFN1Q9P244 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.41■□□□□ 0.7
LRFN1Q9P244 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
LRFN1Q9P244 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRFN1Q9P244 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
LRFN1Q9P244 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 AC003102.1-202ENST00000563394 1796 ntBASIC19.4■□□□□ 0.7
LRFN1Q9P244 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 POU5F1P4-201ENST00000413175 1085 ntBASIC19.4■□□□□ 0.7
LRFN1Q9P244 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 AL121832.2-201ENST00000610979 668 ntBASIC19.4■□□□□ 0.7
LRFN1Q9P244 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
LRFN1Q9P244 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRFN1Q9P244 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRFN1Q9P244 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRFN1Q9P244 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRFN1Q9P244 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.39■□□□□ 0.69
LRFN1Q9P244 AL355802.2-201ENST00000402069 882 ntBASIC19.39■□□□□ 0.69
LRFN1Q9P244 CNN2P6-201ENST00000439038 900 ntBASIC19.39■□□□□ 0.69
LRFN1Q9P244 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.39■□□□□ 0.69
LRFN1Q9P244 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.39■□□□□ 0.69
LRFN1Q9P244 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.39■□□□□ 0.69
LRFN1Q9P244 AL050303.2-201ENST00000619798 666 ntBASIC19.39■□□□□ 0.69
LRFN1Q9P244 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRFN1Q9P244 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 TERF1P5-201ENST00000477545 1207 ntBASIC19.38■□□□□ 0.69
LRFN1Q9P244 AC083906.2-201ENST00000511578 360 ntBASIC19.38■□□□□ 0.69
LRFN1Q9P244 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRFN1Q9P244 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 AC013268.1-206ENST00000638368 961 ntBASIC19.38■□□□□ 0.69
LRFN1Q9P244 AC112229.1-201ENST00000639295 961 ntBASIC19.38■□□□□ 0.69
LRFN1Q9P244 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.38■□□□□ 0.69
LRFN1Q9P244 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN1Q9P244 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN1Q9P244 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN1Q9P244 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.37■□□□□ 0.69
LRFN1Q9P244 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRFN1Q9P244 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 AC133561.1-201ENST00000568600 2415 ntBASIC19.36■□□□□ 0.69
LRFN1Q9P244 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms