Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
SPHK1Q9NYA1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 UBE2DNL-204ENST00000602536 740 ntBASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.4■□□□□ 0.86
SPHK1Q9NYA1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
SPHK1Q9NYA1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SPHK1Q9NYA1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.39■□□□□ 0.86
SPHK1Q9NYA1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SPHK1Q9NYA1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SPHK1Q9NYA1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPHK1Q9NYA1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 AC061975.6-201ENST00000579045 1553 ntBASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPHK1Q9NYA1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms