Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.08■■□□□ 1.13
HCFC1R1Q9NWW0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HCFC1R1Q9NWW0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 AL591742.1-201ENST00000604433 565 ntBASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HCFC1R1Q9NWW0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 AC010980.2-201ENST00000587099 1412 ntBASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 ITM2C-210ENST00000620962 501 ntBASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCFC1R1Q9NWW0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 KRT18P29-201ENST00000397031 1267 ntBASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 RARRES2P4-201ENST00000514074 484 ntBASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 MYC-209ENST00000641252 345 ntBASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
HCFC1R1Q9NWW0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 PRORSD1P-201ENST00000295112 541 ntBASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 AC026471.6-201ENST00000622954 1905 ntBASIC22.04■■□□□ 1.12
HCFC1R1Q9NWW0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HCFC1R1Q9NWW0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms