Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 OXCT2P1-201ENST00000447263 1535 ntBASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LIN7CQ9NUP9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 AF106564.1-201ENST00000607058 2553 ntBASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 AC027682.1-201ENST00000562846 899 ntBASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN7CQ9NUP9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 AC233992.3-201ENST00000607491 485 ntBASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LIN7CQ9NUP9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 AC026471.6-201ENST00000622954 1905 ntBASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 AP001330.3-201ENST00000520123 633 ntBASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 AC005837.3-201ENST00000612163 286 ntBASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.49■□□□□ 0.39
LIN7CQ9NUP9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 MIR939-201ENST00000401314 82 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 SLC47A1P1-202ENST00000449666 945 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 AC091305.1-201ENST00000479476 895 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 AF213884.3-201ENST00000563833 479 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 AC142381.2-201ENST00000566120 298 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 AL034346.1-201ENST00000568244 1277 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 AL031432.3-201ENST00000607698 485 ntBASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LIN7CQ9NUP9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 SUDS3P1-201ENST00000505831 966 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms