Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SCRT2Q9NQ03 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCRT2Q9NQ03 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 AC010997.5-201ENST00000609182 354 ntBASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCRT2Q9NQ03 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 MIR4787-201ENST00000607364 84 ntBASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 AC241377.3-202ENST00000626088 1088 ntBASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 AC241585.3-202ENST00000628937 1088 ntBASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 AC245100.8-202ENST00000629247 1058 ntBASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.67■□□□□ 0.1
SCRT2Q9NQ03 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCRT2Q9NQ03 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 LINC01006-201ENST00000333319 2292 ntBASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.65■□□□□ 0.1
SCRT2Q9NQ03 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SCRT2Q9NQ03 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCRT2Q9NQ03 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SCRT2Q9NQ03 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms