Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.3■■■□□ 2.6
SCAF1Q9H7N4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF1Q9H7N4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.28■■■□□ 2.6
SCAF1Q9H7N4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 DUSP5P2-201ENST00000426873 1033 ntBASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.27■■■□□ 2.6
SCAF1Q9H7N4 RPS2P4-201ENST00000476944 856 ntBASIC31.26■■■□□ 2.6
SCAF1Q9H7N4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.26■■■□□ 2.6
SCAF1Q9H7N4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF1Q9H7N4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF1Q9H7N4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC31.26■■■□□ 2.59
SCAF1Q9H7N4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF1Q9H7N4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF1Q9H7N4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF1Q9H7N4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF1Q9H7N4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 AC007322.1-201ENST00000426983 750 ntBASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC31.24■■■□□ 2.59
SCAF1Q9H7N4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 AL022069.1-201ENST00000568025 1636 ntBASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF1Q9H7N4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 FBXW4P1-201ENST00000426721 2239 ntBASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 AC231657.2-201ENST00000624556 255 ntBASIC31.22■■■□□ 2.59
SCAF1Q9H7N4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 AL158047.1-201ENST00000445918 881 ntBASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
SCAF1Q9H7N4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF1Q9H7N4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF1Q9H7N4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF1Q9H7N4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF1Q9H7N4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF1Q9H7N4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF1Q9H7N4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms