Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG1Q9H6L5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 AC016769.1-201ENST00000409132 1010 ntBASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG1Q9H6L5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RETREG1Q9H6L5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG1Q9H6L5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG1Q9H6L5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG1Q9H6L5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 MYCNOS-205ENST00000641950 531 ntBASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG1Q9H6L5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 AC243732.1-201ENST00000612648 864 ntBASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG1Q9H6L5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG1Q9H6L5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms