Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.99■■□□□ 1.59
RNF41Q9H4P4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF41Q9H4P4 AC137761.2-201ENST00000561729 223 ntBASIC24.99■■□□□ 1.59
RNF41Q9H4P4 AC145350.3-201ENST00000569033 163 ntBASIC24.99■■□□□ 1.59
RNF41Q9H4P4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RNF41Q9H4P4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.99■■□□□ 1.59
RNF41Q9H4P4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 POU5F1P4-201ENST00000413175 1085 ntBASIC24.98■■□□□ 1.59
RNF41Q9H4P4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 KRT18P20-201ENST00000548986 1279 ntBASIC24.98■■□□□ 1.59
RNF41Q9H4P4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF41Q9H4P4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF41Q9H4P4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 KRT18P11-201ENST00000435214 1283 ntBASIC24.96■■□□□ 1.59
RNF41Q9H4P4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 FBXW4P1-201ENST00000426721 2239 ntBASIC24.96■■□□□ 1.59
RNF41Q9H4P4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF41Q9H4P4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.95■■□□□ 1.59
RNF41Q9H4P4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.95■■□□□ 1.59
RNF41Q9H4P4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.95■■□□□ 1.59
RNF41Q9H4P4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RNF41Q9H4P4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 AC016769.1-201ENST00000409132 1010 ntBASIC24.95■■□□□ 1.58
RNF41Q9H4P4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 AC244015.2-201ENST00000616358 1861 ntBASIC24.95■■□□□ 1.58
RNF41Q9H4P4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.95■■□□□ 1.58
RNF41Q9H4P4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 AC006015.1-201ENST00000429970 570 ntBASIC24.94■■□□□ 1.58
RNF41Q9H4P4 AC120498.10-201ENST00000621827 505 ntBASIC24.94■■□□□ 1.58
RNF41Q9H4P4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF41Q9H4P4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.93■■□□□ 1.58
RNF41Q9H4P4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms