Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23■■□□□ 1.27
CDT1Q9H211 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDT1Q9H211 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23■■□□□ 1.27
CDT1Q9H211 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23■■□□□ 1.27
CDT1Q9H211 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23■■□□□ 1.27
CDT1Q9H211 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDT1Q9H211 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 AC061975.6-201ENST00000579045 1553 ntBASIC23■■□□□ 1.27
CDT1Q9H211 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDT1Q9H211 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDT1Q9H211 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDT1Q9H211 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDT1Q9H211 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.99■■□□□ 1.27
CDT1Q9H211 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDT1Q9H211 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDT1Q9H211 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.99■■□□□ 1.27
CDT1Q9H211 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDT1Q9H211 EP400NL-214ENST00000641289 2402 ntBASIC22.98■■□□□ 1.27
CDT1Q9H211 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.98■■□□□ 1.27
CDT1Q9H211 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDT1Q9H211 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDT1Q9H211 POU5F1P4-201ENST00000413175 1085 ntBASIC22.98■■□□□ 1.27
CDT1Q9H211 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.98■■□□□ 1.27
CDT1Q9H211 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.98■■□□□ 1.27
CDT1Q9H211 DUX4L16-201ENST00000555130 1264 ntBASIC22.98■■□□□ 1.27
CDT1Q9H211 SLC7A5P1-201ENST00000568957 537 ntBASIC22.98■■□□□ 1.27
CDT1Q9H211 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CDT1Q9H211 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CDT1Q9H211 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDT1Q9H211 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDT1Q9H211 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDT1Q9H211 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CDT1Q9H211 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.97■■□□□ 1.27
CDT1Q9H211 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDT1Q9H211 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDT1Q9H211 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.96■■□□□ 1.27
CDT1Q9H211 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.96■■□□□ 1.27
CDT1Q9H211 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.96■■□□□ 1.27
CDT1Q9H211 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDT1Q9H211 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.96■■□□□ 1.27
CDT1Q9H211 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.96■■□□□ 1.27
CDT1Q9H211 AC010536.3-201ENST00000620306 533 ntBASIC22.96■■□□□ 1.27
CDT1Q9H211 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDT1Q9H211 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDT1Q9H211 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDT1Q9H211 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.96■■□□□ 1.27
CDT1Q9H211 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CDT1Q9H211 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.95■■□□□ 1.26
CDT1Q9H211 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.95■■□□□ 1.26
CDT1Q9H211 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.95■■□□□ 1.26
CDT1Q9H211 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 AC026185.1-201ENST00000445748 174 ntBASIC22.95■■□□□ 1.26
CDT1Q9H211 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.95■■□□□ 1.26
CDT1Q9H211 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.95■■□□□ 1.26
CDT1Q9H211 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.95■■□□□ 1.26
CDT1Q9H211 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDT1Q9H211 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CDT1Q9H211 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.95■■□□□ 1.26
CDT1Q9H211 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.95■■□□□ 1.26
CDT1Q9H211 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CDT1Q9H211 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.94■■□□□ 1.26
CDT1Q9H211 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.94■■□□□ 1.26
CDT1Q9H211 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CDT1Q9H211 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.94■■□□□ 1.26
CDT1Q9H211 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.94■■□□□ 1.26
CDT1Q9H211 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CDT1Q9H211 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDT1Q9H211 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms