Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 MYH10-204ENST00000411957 732 ntTSL 316.58■□□□□ 0.242e-7■■■■□ 22.4
CSTF2TQ9H0L4 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC10.25□□□□□ -0.772e-7■■■■□ 22.4
CSTF2TQ9H0L4 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.92e-7■■■■□ 22.4
CSTF2TQ9H0L4 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC9.43□□□□□ -0.92e-7■■■■□ 22.4
CSTF2TQ9H0L4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.443e-7■■■■□ 22.4
CSTF2TQ9H0L4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.67■□□□□ 0.748e-7■■■■□ 22.4
CSTF2TQ9H0L4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.48e-7■■■■□ 22.4
CSTF2TQ9H0L4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.12■□□□□ 0.018e-7■■■■□ 22.4
CSTF2TQ9H0L4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.61□□□□□ -0.078e-7■■■■□ 22.4
CSTF2TQ9H0L4 AC073111.5-207ENST00000642008 571 nt16.02■□□□□ 0.168e-8■■■■□ 22.4
CSTF2TQ9H0L4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.33e-21■■■■□ 22.4
CSTF2TQ9H0L4 MNX1-206ENST00000479817 169 ntTSL 1 (best)8.41□□□□□ -1.061e-6■■■■□ 22.4
CSTF2TQ9H0L4 MMP17-210ENST00000545671 775 ntTSL 322.93■■□□□ 1.261e-6■■■■□ 22.4
CSTF2TQ9H0L4 MMP17-211ENST00000545790 552 ntTSL 221.75■■□□□ 1.071e-6■■■■□ 22.4
CSTF2TQ9H0L4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.571e-6■■■■□ 22.4
CSTF2TQ9H0L4 TRIP12-202ENST00000343290 583 ntTSL 317.77■□□□□ 0.446e-10■■■■□ 22.4
CSTF2TQ9H0L4 PFKL-205ENST00000466134 5986 ntTSL 219.36■□□□□ 0.692e-7■■■■□ 22.4
CSTF2TQ9H0L4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.082e-7■■■■□ 22.4
CSTF2TQ9H0L4 PFKL-202ENST00000397961 3390 ntTSL 1 (best)13.38□□□□□ -0.272e-7■■■■□ 22.4
CSTF2TQ9H0L4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.211e-8■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.387e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-205ENST00000553980 576 ntTSL 418.17■□□□□ 0.57e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-206ENST00000554478 545 ntTSL 414.79□□□□□ -0.047e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-211ENST00000556174 546 ntTSL 414.69□□□□□ -0.067e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.087e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-212ENST00000556944 609 ntTSL 414.16□□□□□ -0.147e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.27e-12■■■■□ 22.4
CSTF2TQ9H0L4 ZNF219-209ENST00000555697 654 ntTSL 211.72□□□□□ -0.537e-12■■■■□ 22.4
CSTF2TQ9H0L4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.861e-6■■■■□ 22.4
CSTF2TQ9H0L4 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)16.86■□□□□ 0.295e-7■■■■□ 22.4
CSTF2TQ9H0L4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.035e-7■■■■□ 22.4
CSTF2TQ9H0L4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.115e-7■■■■□ 22.4
CSTF2TQ9H0L4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.61e-6■■■■□ 22.4
CSTF2TQ9H0L4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.03■□□□□ -01e-6■■■■□ 22.4
CSTF2TQ9H0L4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.23■□□□□ 0.675e-7■■■■□ 22.4
CSTF2TQ9H0L4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.49■□□□□ 0.555e-7■■■■□ 22.4
CSTF2TQ9H0L4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.35■□□□□ 0.535e-7■■■■□ 22.4
CSTF2TQ9H0L4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.425e-7■■■■□ 22.4
CSTF2TQ9H0L4 TPCN2-206ENST00000635811 3824 ntTSL 513.99□□□□□ -0.175e-7■■■■□ 22.4
CSTF2TQ9H0L4 TPCN2-202ENST00000442692 4376 ntTSL 211.73□□□□□ -0.535e-7■■■■□ 22.4
CSTF2TQ9H0L4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.021e-6■■■■□ 22.4
CSTF2TQ9H0L4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.733e-6■■■■□ 22.4
CSTF2TQ9H0L4 LRRC4B-203ENST00000600381 853 ntTSL 216.8■□□□□ 0.283e-6■■■■□ 22.4
CSTF2TQ9H0L4 PNPLA7-203ENST00000434090 2419 ntTSL 514.34□□□□□ -0.113e-7■■■■□ 22.3
CSTF2TQ9H0L4 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.53e-7■■■■□ 22.3
CSTF2TQ9H0L4 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.563e-7■■■■□ 22.3
CSTF2TQ9H0L4 CFL1-207ENST00000527752 766 ntTSL 511.03□□□□□ -0.643e-6■■■■□ 22.3
CSTF2TQ9H0L4 SREBF1-203ENST00000395751 4653 ntTSL 216.5■□□□□ 0.232e-7■■■■□ 22.3
CSTF2TQ9H0L4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.793e-6■■■■□ 22.3
CSTF2TQ9H0L4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.158e-7■■■■□ 22.3
CSTF2TQ9H0L4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.828e-7■■■■□ 22.3
CSTF2TQ9H0L4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.671e-8■■■■□ 22.3
CSTF2TQ9H0L4 FP565260.6-202ENST00000625036 318 ntTSL 511.68□□□□□ -0.542e-9■■■■□ 22.3
CSTF2TQ9H0L4 FP565260.6-201ENST00000624810 411 ntTSL 511.68□□□□□ -0.542e-9■■■■□ 22.3
CSTF2TQ9H0L4 BCORL1-204ENST00000488135 857 ntTSL 313.65□□□□□ -0.221e-6■■■■□ 22.3
CSTF2TQ9H0L4 BCORL1-206ENST00000607874 468 ntTSL 312.76□□□□□ -0.371e-6■■■■□ 22.3
CSTF2TQ9H0L4 FAM169A-206ENST00000514200 751 ntTSL 417.04■□□□□ 0.324e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-204ENST00000418005 563 ntTSL 421.53■■□□□ 1.043e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-208ENST00000464301 571 ntTSL 414.1□□□□□ -0.153e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-207ENST00000458054 593 ntTSL 48.68□□□□□ -1.023e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-203ENST00000412905 337 ntTSL 37.81□□□□□ -1.163e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-206ENST00000444421 544 ntTSL 47.4□□□□□ -1.223e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-205ENST00000430412 4478 ntTSL 25.64□□□□□ -1.513e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.863e-11■■■■□ 22.3
CSTF2TQ9H0L4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.013e-11■■■■□ 22.3
CSTF2TQ9H0L4 NCOA2-205ENST00000520416 526 ntTSL 319.01■□□□□ 0.631e-10■■■■□ 22.3
CSTF2TQ9H0L4 TCF25-208ENST00000563032 274 ntTSL 219.25■□□□□ 0.672e-8■■■■□ 22.3
CSTF2TQ9H0L4 TCF25-212ENST00000564652 860 ntTSL 318.93■□□□□ 0.622e-8■■■■□ 22.3
CSTF2TQ9H0L4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.86■□□□□ 0.292e-8■■■■□ 22.3
CSTF2TQ9H0L4 TCF25-203ENST00000561585 981 ntTSL 216.14■□□□□ 0.172e-8■■■■□ 22.3
CSTF2TQ9H0L4 TCF25-214ENST00000565196 655 ntTSL 515.31■□□□□ 0.042e-8■■■■□ 22.3
CSTF2TQ9H0L4 ZNF12-202ENST00000394917 662 ntTSL 323.31■■□□□ 1.322e-6■■■■□ 22.3
CSTF2TQ9H0L4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.442e-6■■■■□ 22.3
CSTF2TQ9H0L4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.412e-6■■■■□ 22.3
CSTF2TQ9H0L4 MAEA-212ENST00000509531 1001 ntTSL 1 (best)18.2■□□□□ 0.58e-7■■■■□ 22.3
CSTF2TQ9H0L4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17■□□□□ 0.318e-7■■■■□ 22.3
CSTF2TQ9H0L4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.12■□□□□ 0.178e-7■■■■□ 22.3
CSTF2TQ9H0L4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.118e-7■■■■□ 22.3
CSTF2TQ9H0L4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13□□□□□ -0.338e-7■■■■□ 22.3
CSTF2TQ9H0L4 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.287e-8■■■■□ 22.3
CSTF2TQ9H0L4 PASK-214ENST00000493544 5174 ntTSL 1 (best)12.89□□□□□ -0.357e-8■■■■□ 22.3
CSTF2TQ9H0L4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.357e-8■■■■□ 22.3
CSTF2TQ9H0L4 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.7□□□□□ -0.387e-8■■■■□ 22.3
CSTF2TQ9H0L4 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.667e-8■■■■□ 22.3
CSTF2TQ9H0L4 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.687e-8■■■■□ 22.3
CSTF2TQ9H0L4 ARHGEF2-213ENST00000476273 668 ntTSL 313.06□□□□□ -0.323e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.526e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.326e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.146e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-207ENST00000587089 880 ntTSL 515.22■□□□□ 0.036e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.22■□□□□ 0.036e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.156e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.176e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.226e-7■■■■□ 22.2
CSTF2TQ9H0L4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.446e-7■■■■□ 22.2
CSTF2TQ9H0L4 PRKAR1B-209ENST00000478198 602 ntTSL 315.83■□□□□ 0.127e-7■■■■□ 22.2
CSTF2TQ9H0L4 IKZF1-215ENST00000492119 584 ntTSL 35.44□□□□□ -1.541e-6■■■■□ 22.2
CSTF2TQ9H0L4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.51■□□□□ 0.396e-7■■■■□ 22.2
CSTF2TQ9H0L4 PDS5A-205ENST00000506262 559 ntTSL 312.72□□□□□ -0.374e-8■■■■□ 22.2
CSTF2TQ9H0L4 RHBDL1-203ENST00000450775 1566 ntTSL 222.66■■□□□ 1.222e-7■■■■□ 22.2
Retrieved 100 of 19,151 protein–RNA pairs in 132.5 ms