Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 MTND2P8-201ENST00000450555 1025 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 RN7SL339P-201ENST00000580597 296 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AC098483.2-201ENST00000603158 454 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AC093765.1-201ENST00000603758 881 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AL035417.2-201ENST00000603887 796 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 RBM11P1-201ENST00000604951 799 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 KATNBL1P5-201ENST00000605015 517 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AL357562.1-201ENST00000624911 609 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
KRTAP3-3Q9BYR6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
KRTAP3-3Q9BYR6 Z98755.1-201ENST00000407015 1384 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 MTND4P8-201ENST00000514997 1362 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AL512635.1-201ENST00000414056 832 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 BMP6P1-201ENST00000431230 679 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 MTND2P28-201ENST00000457540 1044 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AP003102.1-201ENST00000525638 661 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 CR383656.14-201ENST00000551951 406 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC239868.3-201ENST00000577853 1234 ntBASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.95□□□□□ -0.34
KRTAP3-3Q9BYR6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC005224.1-201ENST00000458492 1537 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 NXT2-204ENST00000372107 937 ntTSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AL138880.1-201ENST00000405824 642 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC074367.1-201ENST00000438685 1125 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 NDUFA12P1-201ENST00000455914 406 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 METTL15P1-201ENST00000481421 1045 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 F11-205ENST00000492972 1204 ntTSL 2 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC025171.4-201ENST00000607250 1047 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC109347.2-201ENST00000610220 349 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AL359513.1-201ENST00000614364 557 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AL049777.1-201ENST00000622740 518 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AC099654.8-201ENST00000637757 681 ntBASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KRTAP3-3Q9BYR6 MS4A3-202ENST00000358152 1516 ntTSL 5 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 ZNF410-219ENST00000556797 1311 ntTSL 2 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AP004607.7-201ENST00000527152 1677 ntBASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 OR6C71P-201ENST00000432580 913 ntBASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 LAMTOR3P2-201ENST00000504479 232 ntBASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AP004247.1-201ENST00000531556 1289 ntBASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AC124947.2-201ENST00000547118 1133 ntBASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC12.93□□□□□ -0.34
KRTAP3-3Q9BYR6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms