Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE1Q99829 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE1Q99829 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CPNE1Q99829 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE1Q99829 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.12■□□□□ 0.97
CPNE1Q99829 AC233992.3-201ENST00000607491 485 ntBASIC21.12■□□□□ 0.97
CPNE1Q99829 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE1Q99829 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE1Q99829 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE1Q99829 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CPNE1Q99829 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 UNC93B3-201ENST00000308076 687 ntBASIC21.11■□□□□ 0.97
CPNE1Q99829 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE1Q99829 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE1Q99829 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE1Q99829 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CPNE1Q99829 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPNE1Q99829 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE1Q99829 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE1Q99829 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE1Q99829 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE1Q99829 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE1Q99829 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE1Q99829 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE1Q99829 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CPNE1Q99829 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.09■□□□□ 0.97
CPNE1Q99829 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CPNE1Q99829 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE1Q99829 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE1Q99829 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPNE1Q99829 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE1Q99829 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE1Q99829 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPNE1Q99829 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE1Q99829 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.08■□□□□ 0.97
CPNE1Q99829 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE1Q99829 AC126544.1-201ENST00000580842 1059 ntBASIC21.08■□□□□ 0.97
CPNE1Q99829 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CPNE1Q99829 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE1Q99829 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CPNE1Q99829 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
CPNE1Q99829 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.08■□□□□ 0.96
CPNE1Q99829 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CPNE1Q99829 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE1Q99829 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE1Q99829 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 IGHV3-19-201ENST00000521488 291 ntBASIC21.07■□□□□ 0.96
CPNE1Q99829 AC024257.2-201ENST00000549699 147 ntBASIC21.07■□□□□ 0.96
CPNE1Q99829 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE1Q99829 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE1Q99829 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE1Q99829 AL157384.1-201ENST00000445995 2473 ntBASIC21.07■□□□□ 0.96
CPNE1Q99829 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE1Q99829 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms