Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.24■□□□□ 0.83
CMKLR1Q99788 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMKLR1Q99788 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMKLR1Q99788 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMKLR1Q99788 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMKLR1Q99788 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMKLR1Q99788 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CMKLR1Q99788 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 AC137767.1-201ENST00000602918 1920 ntBASIC20.23■□□□□ 0.83
CMKLR1Q99788 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 AC098934.4-201ENST00000564127 592 ntBASIC20.23■□□□□ 0.83
CMKLR1Q99788 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 AC066615.1-201ENST00000640911 628 ntBASIC20.23■□□□□ 0.83
CMKLR1Q99788 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 AC012676.1-201ENST00000574705 1949 ntBASIC20.23■□□□□ 0.83
CMKLR1Q99788 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CMKLR1Q99788 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CMKLR1Q99788 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
CMKLR1Q99788 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CMKLR1Q99788 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.22■□□□□ 0.83
CMKLR1Q99788 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.22■□□□□ 0.83
CMKLR1Q99788 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.22■□□□□ 0.83
CMKLR1Q99788 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CMKLR1Q99788 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CMKLR1Q99788 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CMKLR1Q99788 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CMKLR1Q99788 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CMKLR1Q99788 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.21■□□□□ 0.83
CMKLR1Q99788 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 KRT16P2-201ENST00000414673 1423 ntBASIC20.2■□□□□ 0.82
CMKLR1Q99788 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 RNA5SP413-201ENST00000516373 109 ntBASIC20.2■□□□□ 0.82
CMKLR1Q99788 AC016405.3-201ENST00000607710 860 ntBASIC20.2■□□□□ 0.82
CMKLR1Q99788 AC092118.2-201ENST00000613495 667 ntBASIC20.2■□□□□ 0.82
CMKLR1Q99788 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CMKLR1Q99788 AC068473.5-201ENST00000616428 2072 ntBASIC20.2■□□□□ 0.82
CMKLR1Q99788 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CMKLR1Q99788 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
CMKLR1Q99788 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.19■□□□□ 0.82
CMKLR1Q99788 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.19■□□□□ 0.82
CMKLR1Q99788 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 POU5F1P3-201ENST00000428824 1078 ntBASIC20.19■□□□□ 0.82
CMKLR1Q99788 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.19■□□□□ 0.82
CMKLR1Q99788 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.19■□□□□ 0.82
CMKLR1Q99788 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CMKLR1Q99788 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms