Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 IRS3P-201ENST00000223076 1006 ntBASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 SMUG1P1-201ENST00000590640 811 ntBASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 AC003102.1-202ENST00000563394 1796 ntBASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 AC104564.3-201ENST00000582367 638 ntBASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 TSPY26P-201ENST00000476365 1326 ntBASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXN4Q96NZ1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
FOXN4Q96NZ1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXN4Q96NZ1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 IGHV3-19-201ENST00000521488 291 ntBASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 MIR6821-201ENST00000617625 74 ntBASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN4Q96NZ1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 AC097381.1-201ENST00000429019 1296 ntBASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 AL024507.2-201ENST00000606070 2574 ntBASIC18.88■□□□□ 0.61
FOXN4Q96NZ1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 AL034346.1-201ENST00000568244 1277 ntBASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
FOXN4Q96NZ1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms