Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 AL355075.4-201ENST00000554988 638 ntBASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP3BQ96NU0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
CNTNAP3BQ96NU0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
CNTNAP3BQ96NU0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CNTNAP3BQ96NU0 ERN1-208ENST00000606895 2068 ntBASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 AC138907.5-202ENST00000569484 235 ntBASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 AC060766.5-201ENST00000590539 871 ntBASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 AL161729.1-201ENST00000604104 1402 ntBASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3BQ96NU0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 AC133561.1-201ENST00000568600 2415 ntBASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 LINC01529-204ENST00000636474 1715 ntBASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 EEF1DP3-203ENST00000566025 782 ntBASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3BQ96NU0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP3BQ96NU0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 AP001412.1-201ENST00000608405 714 ntBASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.23■□□□□ 0.83
CNTNAP3BQ96NU0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CNTNAP3BQ96NU0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 LSM12P1-201ENST00000411836 588 ntBASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 AC069544.1-201ENST00000609399 999 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms