Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 UBE2DNL-204ENST00000602536 740 ntBASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRICKLE1Q96MT3 AC010542.4-201ENST00000563151 1910 ntBASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRICKLE1Q96MT3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 AC090192.1-201ENST00000517740 490 ntBASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRICKLE1Q96MT3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRICKLE1Q96MT3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 MFSD11-216ENST00000590393 1141 ntBASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 AC080038.1-201ENST00000611274 1154 ntBASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 BID-214ENST00000617586 542 ntTSL 5 BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE1Q96MT3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRICKLE1Q96MT3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRICKLE1Q96MT3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 AC073111.5-205ENST00000641717 521 ntBASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
PRICKLE1Q96MT3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE1Q96MT3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE1Q96MT3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE1Q96MT3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE1Q96MT3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.81■■□□□ 1.08
PRICKLE1Q96MT3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms