Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.29■■□□□ 1.96
SMARCC1Q92922 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC27.29■■□□□ 1.96
SMARCC1Q92922 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.29■■□□□ 1.96
SMARCC1Q92922 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC1Q92922 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC1Q92922 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC1Q92922 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
SMARCC1Q92922 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMARCC1Q92922 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCC1Q92922 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.28■■□□□ 1.96
SMARCC1Q92922 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMARCC1Q92922 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.27■■□□□ 1.96
SMARCC1Q92922 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMARCC1Q92922 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.96
SMARCC1Q92922 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SMARCC1Q92922 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.26■■□□□ 1.95
SMARCC1Q92922 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SMARCC1Q92922 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC1Q92922 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
SMARCC1Q92922 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC1Q92922 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC27.26■■□□□ 1.95
SMARCC1Q92922 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC1Q92922 USP36-216ENST00000589424 970 ntTSL 5 BASIC27.26■■□□□ 1.95
SMARCC1Q92922 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SMARCC1Q92922 AC137767.1-201ENST00000602918 1920 ntBASIC27.26■■□□□ 1.95
SMARCC1Q92922 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC1Q92922 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC1Q92922 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC1Q92922 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC1Q92922 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 UBE2SP1-201ENST00000450587 669 ntBASIC27.25■■□□□ 1.95
SMARCC1Q92922 AC008550.1-201ENST00000511500 884 ntBASIC27.25■■□□□ 1.95
SMARCC1Q92922 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 AC061975.6-201ENST00000579045 1553 ntBASIC27.25■■□□□ 1.95
SMARCC1Q92922 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC1Q92922 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.25■■□□□ 1.95
SMARCC1Q92922 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SMARCC1Q92922 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC1Q92922 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC1Q92922 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMARCC1Q92922 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SMARCC1Q92922 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC27.23■■□□□ 1.95
SMARCC1Q92922 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
SMARCC1Q92922 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SMARCC1Q92922 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC27.23■■□□□ 1.95
SMARCC1Q92922 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.23■■□□□ 1.95
SMARCC1Q92922 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SMARCC1Q92922 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SMARCC1Q92922 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.22■■□□□ 1.95
SMARCC1Q92922 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC1Q92922 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC1Q92922 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.22■■□□□ 1.95
SMARCC1Q92922 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27.22■■□□□ 1.95
SMARCC1Q92922 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.22■■□□□ 1.95
SMARCC1Q92922 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC1Q92922 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC1Q92922 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SMARCC1Q92922 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.22■■□□□ 1.95
SMARCC1Q92922 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.21■■□□□ 1.95
SMARCC1Q92922 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.21■■□□□ 1.95
SMARCC1Q92922 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC1Q92922 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.21■■□□□ 1.95
SMARCC1Q92922 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC27.21■■□□□ 1.95
SMARCC1Q92922 AC100791.3-201ENST00000617619 330 ntBASIC27.21■■□□□ 1.95
SMARCC1Q92922 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.21■■□□□ 1.95
SMARCC1Q92922 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.21■■□□□ 1.95
SMARCC1Q92922 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMARCC1Q92922 KRT17P1-201ENST00000399211 1546 ntBASIC27.21■■□□□ 1.95
SMARCC1Q92922 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms