Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 C11orf96-202ENST00000528572 1834 ntBASIC19.92■□□□□ 0.78
TM9SF4Q92544 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TM9SF4Q92544 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TM9SF4Q92544 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TM9SF4Q92544 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM9SF4Q92544 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
TM9SF4Q92544 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM9SF4Q92544 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM9SF4Q92544 AC092053.2-201ENST00000640557 1818 ntBASIC19.91■□□□□ 0.78
TM9SF4Q92544 AC104771.1-201ENST00000603335 964 ntBASIC19.91■□□□□ 0.78
TM9SF4Q92544 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM9SF4Q92544 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TM9SF4Q92544 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TM9SF4Q92544 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
TM9SF4Q92544 AC005224.4-201ENST00000583262 1652 ntBASIC19.91■□□□□ 0.78
TM9SF4Q92544 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.9■□□□□ 0.78
TM9SF4Q92544 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.9■□□□□ 0.78
TM9SF4Q92544 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.9■□□□□ 0.78
TM9SF4Q92544 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
TM9SF4Q92544 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TM9SF4Q92544 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TM9SF4Q92544 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TM9SF4Q92544 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
TM9SF4Q92544 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.89■□□□□ 0.77
TM9SF4Q92544 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.89■□□□□ 0.77
TM9SF4Q92544 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TM9SF4Q92544 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.89■□□□□ 0.77
TM9SF4Q92544 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TM9SF4Q92544 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TM9SF4Q92544 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 MIR663A-201ENST00000385250 93 ntBASIC19.88■□□□□ 0.77
TM9SF4Q92544 AL355802.2-201ENST00000402069 882 ntBASIC19.88■□□□□ 0.77
TM9SF4Q92544 CROCCP5-201ENST00000436658 830 ntBASIC19.88■□□□□ 0.77
TM9SF4Q92544 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TM9SF4Q92544 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.88■□□□□ 0.77
TM9SF4Q92544 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 FBXW4P1-201ENST00000426721 2239 ntBASIC19.87■□□□□ 0.77
TM9SF4Q92544 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 AC080038.3-201ENST00000623346 1952 ntBASIC19.87■□□□□ 0.77
TM9SF4Q92544 GPX1P1-201ENST00000388829 606 ntBASIC19.87■□□□□ 0.77
TM9SF4Q92544 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 NCF1B-203ENST00000435988 1254 ntBASIC19.87■□□□□ 0.77
TM9SF4Q92544 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.87■□□□□ 0.77
TM9SF4Q92544 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TM9SF4Q92544 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.86■□□□□ 0.77
TM9SF4Q92544 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM9SF4Q92544 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms