Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC32.78■■■□□ 2.84
CCNB3Q8WWL7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 GUSBP5-202ENST00000510805 1989 ntBASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC32.77■■■□□ 2.84
CCNB3Q8WWL7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CCNB3Q8WWL7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC32.76■■■□□ 2.83
CCNB3Q8WWL7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CCNB3Q8WWL7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
CCNB3Q8WWL7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC32.75■■■□□ 2.83
CCNB3Q8WWL7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC32.74■■■□□ 2.83
CCNB3Q8WWL7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC32.74■■■□□ 2.83
CCNB3Q8WWL7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.74■■■□□ 2.83
CCNB3Q8WWL7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.74■■■□□ 2.83
CCNB3Q8WWL7 AC012676.1-201ENST00000574705 1949 ntBASIC32.74■■■□□ 2.83
CCNB3Q8WWL7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC32.73■■■□□ 2.83
CCNB3Q8WWL7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 AC242852.2-201ENST00000615738 1807 ntBASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CCNB3Q8WWL7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 AC133561.1-201ENST00000568600 2415 ntBASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 MKRN4P-201ENST00000444706 1521 ntBASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CCNB3Q8WWL7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 AC093787.1-201ENST00000450396 207 ntBASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CCNB3Q8WWL7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
CCNB3Q8WWL7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
CCNB3Q8WWL7 MIPEPP3-201ENST00000412105 444 ntBASIC32.7■■■□□ 2.82
CCNB3Q8WWL7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CCNB3Q8WWL7 AC016405.3-201ENST00000607710 860 ntBASIC32.7■■■□□ 2.82
CCNB3Q8WWL7 OR10C1-204ENST00000622521 1039 ntBASIC32.7■■■□□ 2.82
CCNB3Q8WWL7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms