Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 AC005224.4-201ENST00000583262 1652 ntBASIC20.91■□□□□ 0.94
SKA2Q8WVK7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.91■□□□□ 0.94
SKA2Q8WVK7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 AC019069.1-201ENST00000610008 1333 ntBASIC20.9■□□□□ 0.94
SKA2Q8WVK7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 AC104564.3-201ENST00000582367 638 ntBASIC20.9■□□□□ 0.94
SKA2Q8WVK7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SKA2Q8WVK7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SKA2Q8WVK7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SKA2Q8WVK7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SKA2Q8WVK7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SKA2Q8WVK7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.89■□□□□ 0.94
SKA2Q8WVK7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.89■□□□□ 0.93
SKA2Q8WVK7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 AC003102.1-202ENST00000563394 1796 ntBASIC20.89■□□□□ 0.93
SKA2Q8WVK7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SKA2Q8WVK7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKA2Q8WVK7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.87■□□□□ 0.93
SKA2Q8WVK7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SKA2Q8WVK7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SKA2Q8WVK7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SKA2Q8WVK7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SKA2Q8WVK7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SKA2Q8WVK7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 AC027612.3-201ENST00000413684 1047 ntBASIC20.86■□□□□ 0.93
SKA2Q8WVK7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKA2Q8WVK7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms