Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01561Q8N1V8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01561Q8N1V8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC01561Q8N1V8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01561Q8N1V8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01561Q8N1V8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 GABARAPL3-202ENST00000624044 1851 ntBASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 AP006587.3-201ENST00000525742 1516 ntBASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01561Q8N1V8 FEM1AP1-201ENST00000431297 1995 ntBASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 RARRES2P1-201ENST00000474487 481 ntBASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 AC006128.1-201ENST00000624704 1661 ntBASIC14.14□□□□□ -0.15
LINC01561Q8N1V8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 AC010525.1-201ENST00000585559 441 ntBASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC01561Q8N1V8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LINC01561Q8N1V8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms