Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C9orf40Q8IXQ3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C9orf40Q8IXQ3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
C9orf40Q8IXQ3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 AC006015.1-201ENST00000429970 570 ntBASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C9orf40Q8IXQ3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 AC016769.1-201ENST00000409132 1010 ntBASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C9orf40Q8IXQ3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 UBE2DNL-204ENST00000602536 740 ntBASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.55■□□□□ 0.72
C9orf40Q8IXQ3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 AL137784.2-201ENST00000607332 1000 ntBASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 LINC00565-201ENST00000562710 2331 ntBASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
C9orf40Q8IXQ3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 AC061975.6-201ENST00000579045 1553 ntBASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms