Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 CYP2T1P-201ENST00000432607 1285 ntBASIC23.63■■□□□ 1.37
TRIM50Q86XT4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 AC068338.2-201ENST00000563278 1430 ntBASIC23.63■■□□□ 1.37
TRIM50Q86XT4 AC098934.4-201ENST00000564127 592 ntBASIC23.63■■□□□ 1.37
TRIM50Q86XT4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM50Q86XT4 AC061975.6-201ENST00000579045 1553 ntBASIC23.62■■□□□ 1.37
TRIM50Q86XT4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 AF201337.1-201ENST00000520239 748 ntBASIC23.62■■□□□ 1.37
TRIM50Q86XT4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 AC105036.2-201ENST00000569468 176 ntBASIC23.62■■□□□ 1.37
TRIM50Q86XT4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 AC008175.2-201ENST00000612840 297 ntBASIC23.62■■□□□ 1.37
TRIM50Q86XT4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM50Q86XT4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM50Q86XT4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM50Q86XT4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 SLC29A4P1-201ENST00000398760 971 ntBASIC23.59■■□□□ 1.37
TRIM50Q86XT4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 AC133552.2-202ENST00000575694 574 ntBASIC23.59■■□□□ 1.37
TRIM50Q86XT4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRIM50Q86XT4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM50Q86XT4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM50Q86XT4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM50Q86XT4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM50Q86XT4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.58■■□□□ 1.37
TRIM50Q86XT4 AC010542.4-201ENST00000563151 1910 ntBASIC23.58■■□□□ 1.37
TRIM50Q86XT4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM50Q86XT4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
TRIM50Q86XT4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM50Q86XT4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
TRIM50Q86XT4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM50Q86XT4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 ABHD17AP1-201ENST00000358206 933 ntBASIC23.57■■□□□ 1.36
TRIM50Q86XT4 POU5F1P4-201ENST00000413175 1085 ntBASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms