Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYVN1Q86TM6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 LINC02228-203ENST00000641970 1355 ntBASIC20.76■□□□□ 0.91
SYVN1Q86TM6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.76■□□□□ 0.91
SYVN1Q86TM6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 IKBKGP1-201ENST00000612193 1073 ntBASIC20.75■□□□□ 0.91
SYVN1Q86TM6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYVN1Q86TM6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 RARRES2P11-201ENST00000635158 484 ntBASIC20.74■□□□□ 0.91
SYVN1Q86TM6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SYVN1Q86TM6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 KRT18P14-201ENST00000534205 1250 ntBASIC20.73■□□□□ 0.91
SYVN1Q86TM6 TERF1P2-201ENST00000583350 1212 ntBASIC20.73■□□□□ 0.91
SYVN1Q86TM6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYVN1Q86TM6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 AC105233.4-201ENST00000642045 216 ntBASIC20.72■□□□□ 0.91
SYVN1Q86TM6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 AP004607.7-201ENST00000527152 1677 ntBASIC20.72■□□□□ 0.91
SYVN1Q86TM6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.72■□□□□ 0.91
SYVN1Q86TM6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.71■□□□□ 0.91
SYVN1Q86TM6 AC090192.1-201ENST00000517740 490 ntBASIC20.71■□□□□ 0.91
SYVN1Q86TM6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYVN1Q86TM6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms