Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NIPAL3Q6P499 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NIPAL3Q6P499 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 AC105233.4-201ENST00000642045 216 ntBASIC19.19■□□□□ 0.66
NIPAL3Q6P499 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NIPAL3Q6P499 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 MIR572-201ENST00000384983 95 ntBASIC19.18■□□□□ 0.66
NIPAL3Q6P499 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 AC073130.3-201ENST00000624389 2278 ntBASIC19.18■□□□□ 0.66
NIPAL3Q6P499 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.18■□□□□ 0.66
NIPAL3Q6P499 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIPAL3Q6P499 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 SMUG1P1-201ENST00000590640 811 ntBASIC19.16■□□□□ 0.66
NIPAL3Q6P499 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.16■□□□□ 0.66
NIPAL3Q6P499 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms