Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC233992.3-201ENST00000607491 485 ntBASIC19.69■□□□□ 0.74
REEP3Q6NUK4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
REEP3Q6NUK4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
REEP3Q6NUK4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
REEP3Q6NUK4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 AC126544.1-201ENST00000580842 1059 ntBASIC19.66■□□□□ 0.74
REEP3Q6NUK4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
REEP3Q6NUK4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
REEP3Q6NUK4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.64■□□□□ 0.74
REEP3Q6NUK4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 AC024257.2-201ENST00000549699 147 ntBASIC19.64■□□□□ 0.73
REEP3Q6NUK4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 AL136162.1-201ENST00000607711 1078 ntBASIC19.64■□□□□ 0.73
REEP3Q6NUK4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
REEP3Q6NUK4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms