Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 RBM17P2-201ENST00000616397 1405 ntBASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 AL353708.3-201ENST00000610272 989 ntBASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 AC113410.3-201ENST00000623366 203 ntBASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.33■□□□□ 0.53
HIST2H2BCQ6DN03 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 AC053503.5-201ENST00000601508 636 ntBASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIST2H2BCQ6DN03 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H2BCQ6DN03 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H2BCQ6DN03 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 DUSP8P4-201ENST00000399538 1761 ntBASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 TPM4P1-201ENST00000436100 807 ntBASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 AL162412.1-201ENST00000567129 965 ntBASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 AC120498.10-201ENST00000621827 505 ntBASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 AL023875.1-201ENST00000640777 796 ntBASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIST2H2BCQ6DN03 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST2H2BCQ6DN03 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms