Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39BQ5VTQ0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TTC39BQ5VTQ0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TTC39BQ5VTQ0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 AP004607.4-201ENST00000530158 1459 ntBASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 KRT19P1-201ENST00000405746 1186 ntBASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC39BQ5VTQ0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 AC004854.2-201ENST00000608450 1441 ntBASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 AC010542.4-201ENST00000563151 1910 ntBASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39BQ5VTQ0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39BQ5VTQ0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 FAM99A-202ENST00000538190 1989 ntBASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 AC092666.2-201ENST00000613287 246 ntBASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 AC026310.3-201ENST00000625186 2373 ntBASIC21.96■■□□□ 1.11
TTC39BQ5VTQ0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms