Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS13DQ5THJ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 AC053503.5-201ENST00000601508 636 ntBASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS13DQ5THJ4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 MIR4497-201ENST00000583208 89 ntBASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 AP006294.2-201ENST00000641667 209 ntBASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 AL158047.1-201ENST00000445918 881 ntBASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13DQ5THJ4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 FAM210CP-201ENST00000445714 574 ntBASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 Z99916.2-201ENST00000604037 246 ntBASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 AC097658.1-201ENST00000475555 843 ntBASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 AC061975.6-201ENST00000579045 1553 ntBASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13DQ5THJ4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 AC093323.1-202ENST00000635031 2045 ntBASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS13DQ5THJ4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS13DQ5THJ4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS13DQ5THJ4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13DQ5THJ4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13DQ5THJ4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13DQ5THJ4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms