Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFX7Q2KHR2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 UBE2DNL-204ENST00000602536 740 ntBASIC25.72■■□□□ 1.71
RFX7Q2KHR2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RFX7Q2KHR2 AC244015.2-201ENST00000616358 1861 ntBASIC25.71■■□□□ 1.71
RFX7Q2KHR2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 AL050303.2-201ENST00000619798 666 ntBASIC25.71■■□□□ 1.71
RFX7Q2KHR2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.71■■□□□ 1.71
RFX7Q2KHR2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RFX7Q2KHR2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.7■■□□□ 1.71
RFX7Q2KHR2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.7■■□□□ 1.71
RFX7Q2KHR2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RFX7Q2KHR2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.7■■□□□ 1.71
RFX7Q2KHR2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.7■■□□□ 1.71
RFX7Q2KHR2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RFX7Q2KHR2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RFX7Q2KHR2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RFX7Q2KHR2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RFX7Q2KHR2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 NCF1B-203ENST00000435988 1254 ntBASIC25.69■■□□□ 1.7
RFX7Q2KHR2 AC006970.2-201ENST00000450065 779 ntBASIC25.69■■□□□ 1.7
RFX7Q2KHR2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.69■■□□□ 1.7
RFX7Q2KHR2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.68■■□□□ 1.7
RFX7Q2KHR2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 EEF1DP3-203ENST00000566025 782 ntBASIC25.67■■□□□ 1.7
RFX7Q2KHR2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RFX7Q2KHR2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 DUX4L16-201ENST00000555130 1264 ntBASIC25.66■■□□□ 1.7
RFX7Q2KHR2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX7Q2KHR2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 FBXW4P1-201ENST00000426721 2239 ntBASIC25.65■■□□□ 1.7
RFX7Q2KHR2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 AC010141.2-201ENST00000452426 721 ntBASIC25.65■■□□□ 1.7
RFX7Q2KHR2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.65■■□□□ 1.7
RFX7Q2KHR2 MYCNOS-205ENST00000641950 531 ntBASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms