Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.87■□□□□ 0.93
SRP54P61011 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP54P61011 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
SRP54P61011 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SRP54P61011 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP54P61011 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRP54P61011 SLC7A5P1-201ENST00000568957 537 ntBASIC20.86■□□□□ 0.93
SRP54P61011 AC104771.1-201ENST00000603335 964 ntBASIC20.86■□□□□ 0.93
SRP54P61011 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.86■□□□□ 0.93
SRP54P61011 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP54P61011 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP54P61011 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SRP54P61011 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.86■□□□□ 0.93
SRP54P61011 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SRP54P61011 AC012676.1-201ENST00000574705 1949 ntBASIC20.86■□□□□ 0.93
SRP54P61011 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SRP54P61011 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.85■□□□□ 0.93
SRP54P61011 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.85■□□□□ 0.93
SRP54P61011 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.85■□□□□ 0.93
SRP54P61011 AC005181.1-201ENST00000604782 1256 ntBASIC20.85■□□□□ 0.93
SRP54P61011 AC008175.2-201ENST00000612840 297 ntBASIC20.85■□□□□ 0.93
SRP54P61011 AL109923.1-201ENST00000618799 583 ntBASIC20.85■□□□□ 0.93
SRP54P61011 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.85■□□□□ 0.93
SRP54P61011 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.85■□□□□ 0.93
SRP54P61011 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SRP54P61011 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
SRP54P61011 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.84■□□□□ 0.93
SRP54P61011 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.84■□□□□ 0.93
SRP54P61011 GPX1P1-201ENST00000388829 606 ntBASIC20.84■□□□□ 0.93
SRP54P61011 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.84■□□□□ 0.93
SRP54P61011 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SRP54P61011 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.84■□□□□ 0.93
SRP54P61011 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SRP54P61011 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.83■□□□□ 0.93
SRP54P61011 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SRP54P61011 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.83■□□□□ 0.93
SRP54P61011 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
SRP54P61011 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.83■□□□□ 0.93
SRP54P61011 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRP54P61011 AL050303.2-201ENST00000619798 666 ntBASIC20.83■□□□□ 0.93
SRP54P61011 AC120498.10-201ENST00000621827 505 ntBASIC20.83■□□□□ 0.93
SRP54P61011 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SRP54P61011 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRP54P61011 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.83■□□□□ 0.92
SRP54P61011 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.82■□□□□ 0.92
SRP54P61011 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SRP54P61011 AC003102.1-202ENST00000563394 1796 ntBASIC20.82■□□□□ 0.92
SRP54P61011 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP54P61011 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
SRP54P61011 CNN2P6-201ENST00000439038 900 ntBASIC20.82■□□□□ 0.92
SRP54P61011 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.82■□□□□ 0.92
SRP54P61011 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.82■□□□□ 0.92
SRP54P61011 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.82■□□□□ 0.92
SRP54P61011 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP54P61011 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRP54P61011 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SRP54P61011 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SRP54P61011 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.81■□□□□ 0.92
SRP54P61011 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SRP54P61011 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.81■□□□□ 0.92
SRP54P61011 POU5F1P4-201ENST00000413175 1085 ntBASIC20.81■□□□□ 0.92
SRP54P61011 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.81■□□□□ 0.92
SRP54P61011 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SRP54P61011 AL121832.2-201ENST00000610979 668 ntBASIC20.81■□□□□ 0.92
SRP54P61011 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SRP54P61011 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRP54P61011 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRP54P61011 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms