Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
EPHA4P54764 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EPHA4P54764 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA4P54764 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA4P54764 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA4P54764 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
EPHA4P54764 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHA4P54764 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHA4P54764 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHA4P54764 AC003102.1-202ENST00000563394 1796 ntBASIC20.41■□□□□ 0.86
EPHA4P54764 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHA4P54764 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.41■□□□□ 0.86
EPHA4P54764 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
EPHA4P54764 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
EPHA4P54764 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.4■□□□□ 0.86
EPHA4P54764 AC083906.2-201ENST00000511578 360 ntBASIC20.4■□□□□ 0.86
EPHA4P54764 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 AC133552.2-202ENST00000575694 574 ntBASIC20.4■□□□□ 0.86
EPHA4P54764 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.4■□□□□ 0.86
EPHA4P54764 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHA4P54764 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.4■□□□□ 0.86
EPHA4P54764 AC080038.3-201ENST00000623346 1952 ntBASIC20.4■□□□□ 0.86
EPHA4P54764 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EPHA4P54764 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
EPHA4P54764 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.39■□□□□ 0.86
EPHA4P54764 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA4P54764 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA4P54764 AL355802.2-201ENST00000402069 882 ntBASIC20.39■□□□□ 0.85
EPHA4P54764 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
EPHA4P54764 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHA4P54764 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.39■□□□□ 0.85
EPHA4P54764 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.39■□□□□ 0.85
EPHA4P54764 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA4P54764 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA4P54764 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHA4P54764 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
EPHA4P54764 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHA4P54764 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.38■□□□□ 0.85
EPHA4P54764 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHA4P54764 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.38■□□□□ 0.85
EPHA4P54764 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA4P54764 TSPY6P-201ENST00000448518 926 ntBASIC20.38■□□□□ 0.85
EPHA4P54764 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
EPHA4P54764 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.38■□□□□ 0.85
EPHA4P54764 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
EPHA4P54764 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.38■□□□□ 0.85
EPHA4P54764 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EPHA4P54764 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA4P54764 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA4P54764 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA4P54764 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.37■□□□□ 0.85
EPHA4P54764 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.37■□□□□ 0.85
EPHA4P54764 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.37■□□□□ 0.85
EPHA4P54764 AC142086.2-201ENST00000569753 217 ntBASIC20.37■□□□□ 0.85
EPHA4P54764 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EPHA4P54764 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EPHA4P54764 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
EPHA4P54764 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
EPHA4P54764 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.36■□□□□ 0.85
EPHA4P54764 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 SLC29A4P1-201ENST00000398760 971 ntBASIC20.36■□□□□ 0.85
EPHA4P54764 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA4P54764 AF201337.1-201ENST00000520239 748 ntBASIC20.36■□□□□ 0.85
EPHA4P54764 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA4P54764 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.36■□□□□ 0.85
EPHA4P54764 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
EPHA4P54764 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EPHA4P54764 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.35■□□□□ 0.85
EPHA4P54764 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.35■□□□□ 0.85
EPHA4P54764 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.35■□□□□ 0.85
EPHA4P54764 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
EPHA4P54764 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 GUSBP6-202ENST00000438529 1198 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms