Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMSP52788 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMSP52788 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.73■□□□□ 0.75
SMSP52788 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.73■□□□□ 0.75
SMSP52788 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.73■□□□□ 0.75
SMSP52788 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.73■□□□□ 0.75
SMSP52788 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMSP52788 AC105233.4-201ENST00000642045 216 ntBASIC19.73■□□□□ 0.75
SMSP52788 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMSP52788 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMSP52788 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMSP52788 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMSP52788 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMSP52788 AC010525.1-201ENST00000585559 441 ntBASIC19.72■□□□□ 0.75
SMSP52788 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.72■□□□□ 0.75
SMSP52788 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SMSP52788 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMSP52788 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.71■□□□□ 0.75
SMSP52788 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMSP52788 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMSP52788 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.71■□□□□ 0.75
SMSP52788 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.71■□□□□ 0.75
SMSP52788 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SMSP52788 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.71■□□□□ 0.75
SMSP52788 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.71■□□□□ 0.75
SMSP52788 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.71■□□□□ 0.75
SMSP52788 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SMSP52788 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMSP52788 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMSP52788 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.7■□□□□ 0.74
SMSP52788 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.7■□□□□ 0.74
SMSP52788 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.7■□□□□ 0.74
SMSP52788 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SMSP52788 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.7■□□□□ 0.74
SMSP52788 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.7■□□□□ 0.74
SMSP52788 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.7■□□□□ 0.74
SMSP52788 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.7■□□□□ 0.74
SMSP52788 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.7■□□□□ 0.74
SMSP52788 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMSP52788 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.69■□□□□ 0.74
SMSP52788 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SMSP52788 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.69■□□□□ 0.74
SMSP52788 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.69■□□□□ 0.74
SMSP52788 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.69■□□□□ 0.74
SMSP52788 AC016769.1-201ENST00000409132 1010 ntBASIC19.69■□□□□ 0.74
SMSP52788 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.69■□□□□ 0.74
SMSP52788 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMSP52788 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMSP52788 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms