Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCFC1P51610 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HCFC1P51610 GCSHP5-201ENST00000443090 522 ntBASIC18.54■□□□□ 0.56
HCFC1P51610 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HCFC1P51610 AC008175.2-201ENST00000612840 297 ntBASIC18.54■□□□□ 0.56
HCFC1P51610 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.54■□□□□ 0.56
HCFC1P51610 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 AC010980.2-201ENST00000587099 1412 ntBASIC18.53■□□□□ 0.56
HCFC1P51610 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HCFC1P51610 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.53■□□□□ 0.56
HCFC1P51610 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.53■□□□□ 0.56
HCFC1P51610 UNC93B5-201ENST00000530315 699 ntBASIC18.53■□□□□ 0.56
HCFC1P51610 KRT16P2-201ENST00000414673 1423 ntBASIC18.53■□□□□ 0.56
HCFC1P51610 RBM17P2-201ENST00000616397 1405 ntBASIC18.53■□□□□ 0.56
HCFC1P51610 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.53■□□□□ 0.56
HCFC1P51610 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HCFC1P51610 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.52■□□□□ 0.56
HCFC1P51610 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.52■□□□□ 0.56
HCFC1P51610 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
HCFC1P51610 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.52■□□□□ 0.56
HCFC1P51610 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC1P51610 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.52■□□□□ 0.56
HCFC1P51610 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC1P51610 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC1P51610 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC1P51610 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC1P51610 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.52■□□□□ 0.56
HCFC1P51610 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.52■□□□□ 0.56
HCFC1P51610 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.52■□□□□ 0.56
HCFC1P51610 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC1P51610 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC1P51610 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC1P51610 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HCFC1P51610 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC1P51610 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.55
HCFC1P51610 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HCFC1P51610 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.52■□□□□ 0.55
HCFC1P51610 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.52■□□□□ 0.55
HCFC1P51610 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC1P51610 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCFC1P51610 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.51■□□□□ 0.55
HCFC1P51610 AC097658.1-201ENST00000475555 843 ntBASIC18.51■□□□□ 0.55
HCFC1P51610 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.51■□□□□ 0.55
HCFC1P51610 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCFC1P51610 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCFC1P51610 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HCFC1P51610 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HCFC1P51610 POU5F1P4-201ENST00000413175 1085 ntBASIC18.5■□□□□ 0.55
HCFC1P51610 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.5■□□□□ 0.55
HCFC1P51610 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.5■□□□□ 0.55
HCFC1P51610 AC008694.1-202ENST00000636953 945 ntBASIC18.5■□□□□ 0.55
HCFC1P51610 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.5■□□□□ 0.55
HCFC1P51610 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC1P51610 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
HCFC1P51610 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.49■□□□□ 0.55
HCFC1P51610 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.49■□□□□ 0.55
HCFC1P51610 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.49■□□□□ 0.55
HCFC1P51610 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 AC120498.10-201ENST00000621827 505 ntBASIC18.49■□□□□ 0.55
HCFC1P51610 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.49■□□□□ 0.55
HCFC1P51610 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.49■□□□□ 0.55
HCFC1P51610 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC1P51610 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC1P51610 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.48■□□□□ 0.55
HCFC1P51610 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms