Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB28P51157 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB28P51157 AC137761.2-201ENST00000561729 223 ntBASIC20.46■□□□□ 0.87
RAB28P51157 AC145350.3-201ENST00000569033 163 ntBASIC20.46■□□□□ 0.87
RAB28P51157 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB28P51157 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB28P51157 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB28P51157 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB28P51157 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB28P51157 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB28P51157 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB28P51157 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RAB28P51157 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB28P51157 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
RAB28P51157 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB28P51157 FBXW4P1-201ENST00000426721 2239 ntBASIC20.44■□□□□ 0.86
RAB28P51157 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB28P51157 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB28P51157 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB28P51157 AC008175.2-201ENST00000612840 297 ntBASIC20.44■□□□□ 0.86
RAB28P51157 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB28P51157 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB28P51157 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB28P51157 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB28P51157 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
RAB28P51157 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.43■□□□□ 0.86
RAB28P51157 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB28P51157 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 KRT18P20-201ENST00000548986 1279 ntBASIC20.43■□□□□ 0.86
RAB28P51157 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB28P51157 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB28P51157 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RAB28P51157 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB28P51157 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB28P51157 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB28P51157 AC016769.1-201ENST00000409132 1010 ntBASIC20.42■□□□□ 0.86
RAB28P51157 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 POU5F1P4-201ENST00000413175 1085 ntBASIC20.42■□□□□ 0.86
RAB28P51157 KRT18P11-201ENST00000435214 1283 ntBASIC20.42■□□□□ 0.86
RAB28P51157 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB28P51157 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB28P51157 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.42■□□□□ 0.86
RAB28P51157 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB28P51157 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB28P51157 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB28P51157 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB28P51157 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB28P51157 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB28P51157 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB28P51157 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB28P51157 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB28P51157 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB28P51157 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB28P51157 AC006015.1-201ENST00000429970 570 ntBASIC20.41■□□□□ 0.86
RAB28P51157 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB28P51157 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB28P51157 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAB28P51157 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms