Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RPL17AYKL180W 555 nt2.76□□□□□ -1.97
CDC40P40968 YOL114CYOL114C 609 nt2.76□□□□□ -1.97
CDC40P40968 IRC13YOR235W 315 nt2.76□□□□□ -1.97
CDC40P40968 SWD3YBR175W 948 nt2.76□□□□□ -1.97
CDC40P40968 FRE8YLR047C 2061 nt2.75□□□□□ -1.97
CDC40P40968 SUP45YBR143C 1314 nt2.75□□□□□ -1.97
CDC40P40968 YKL100CYKL100C 1764 nt2.75□□□□□ -1.97
CDC40P40968 YDR271CYDR271C 372 nt2.75□□□□□ -1.97
CDC40P40968 RPA12YJR063W 378 nt2.75□□□□□ -1.97
CDC40P40968 DAD2YKR083C 402 nt2.75□□□□□ -1.97
CDC40P40968 YBL065WYBL065W 345 nt2.75□□□□□ -1.97
CDC40P40968 YBR292CYBR292C 372 nt2.75□□□□□ -1.97
CDC40P40968 YBR300CYBR300C 498 nt2.75□□□□□ -1.97
CDC40P40968 MED1YPR070W 1701 nt2.75□□□□□ -1.97
CDC40P40968 RRM3YHR031C 2172 nt2.75□□□□□ -1.97
CDC40P40968 PPQ1YPL179W 1650 nt2.75□□□□□ -1.97
CDC40P40968 MRS2YOR334W 1413 nt2.75□□□□□ -1.97
CDC40P40968 ITC1YGL133W 3795 nt2.75□□□□□ -1.97
CDC40P40968 STU2YLR045C 2667 nt2.75□□□□□ -1.97
CDC40P40968 MSH4YFL003C 2637 nt2.74□□□□□ -1.97
CDC40P40968 YNL011CYNL011C 1335 nt2.74□□□□□ -1.97
CDC40P40968 YDR133CYDR133C 336 nt2.74□□□□□ -1.97
CDC40P40968 MRPL38YKL170W 417 nt2.74□□□□□ -1.97
CDC40P40968 SAM37YMR060C 984 nt2.74□□□□□ -1.97
CDC40P40968 FMP41YNL168C 780 nt2.74□□□□□ -1.97
CDC40P40968 PEX15YOL044W 1152 nt2.74□□□□□ -1.97
CDC40P40968 PNO1YOR145C 825 nt2.74□□□□□ -1.97
CDC40P40968 YOR387CYOR387C 621 nt2.74□□□□□ -1.97
CDC40P40968 ATG29YPL166W 642 nt2.74□□□□□ -1.97
CDC40P40968 TDA1YMR291W 1761 nt2.74□□□□□ -1.97
CDC40P40968 CCT7YJL111W 1653 nt2.73□□□□□ -1.97
CDC40P40968 SLH1YGR271W 5904 nt2.73□□□□□ -1.97
CDC40P40968 RPA14YDR156W 414 nt2.73□□□□□ -1.97
CDC40P40968 HMO1YDR174W 741 nt2.73□□□□□ -1.97
CDC40P40968 MFA1YDR461W 111 nt2.73□□□□□ -1.97
CDC40P40968 YGL159WYGL159W 1113 nt2.73□□□□□ -1.97
CDC40P40968 MRPL9YGR220C 810 nt2.73□□□□□ -1.97
CDC40P40968 FOL2YGR267C 732 nt2.73□□□□□ -1.97
CDC40P40968 DAL2YIR029W 1032 nt2.73□□□□□ -1.97
CDC40P40968 SED5YLR026C 1023 nt2.73□□□□□ -1.97
CDC40P40968 NDL1YLR254C 570 nt2.73□□□□□ -1.97
CDC40P40968 GSP1YLR293C 660 nt2.73□□□□□ -1.97
CDC40P40968 YNL043CYNL043C 321 nt2.73□□□□□ -1.97
CDC40P40968 CSH1YBR161W 1131 nt2.73□□□□□ -1.97
CDC40P40968 NUM1YDR150W 8247 nt2.73□□□□□ -1.97
CDC40P40968 POL4YCR014C 1749 nt2.73□□□□□ -1.97
CDC40P40968 VAC14YLR386W 2643 nt2.72□□□□□ -1.97
CDC40P40968 ARP4YJL081C 1470 nt2.72□□□□□ -1.97
CDC40P40968 YIL082W-AYIL082W-A 4497 nt2.72□□□□□ -1.97
CDC40P40968 YDR124WYDR124W 975 nt2.72□□□□□ -1.97
CDC40P40968 RGI1YER067W 486 nt2.72□□□□□ -1.97
CDC40P40968 YFH7YFR007W 1062 nt2.72□□□□□ -1.97
CDC40P40968 YGL177WYGL177W 348 nt2.72□□□□□ -1.97
CDC40P40968 TCD1YHR003C 1290 nt2.72□□□□□ -1.97
CDC40P40968 PHD1YKL043W 1101 nt2.72□□□□□ -1.97
CDC40P40968 YLR230WYLR230W 306 nt2.72□□□□□ -1.97
CDC40P40968 UNG1YML021C 1080 nt2.72□□□□□ -1.97
CDC40P40968 PEX5YDR244W 1839 nt2.72□□□□□ -1.97
CDC40P40968 BI3Q0115 1554 nt2.71□□□□□ -1.98
CDC40P40968 TSC11YER093C 4293 nt2.71□□□□□ -1.98
CDC40P40968 PSF1YDR013W 627 nt2.71□□□□□ -1.98
CDC40P40968 PLP1YDR183W 693 nt2.71□□□□□ -1.98
CDC40P40968 VMA8YEL051W 771 nt2.71□□□□□ -1.98
CDC40P40968 PEX14YGL153W 1026 nt2.71□□□□□ -1.98
CDC40P40968 RPS0AYGR214W 759 nt2.71□□□□□ -1.98
CDC40P40968 FUR1YHR128W 651 nt2.71□□□□□ -1.98
CDC40P40968 ARG3YJL088W 1017 nt2.71□□□□□ -1.98
CDC40P40968 YKL070WYKL070W 510 nt2.71□□□□□ -1.98
CDC40P40968 VMA6YLR447C 1038 nt2.71□□□□□ -1.98
CDC40P40968 PML39YML107C 1005 nt2.71□□□□□ -1.98
CDC40P40968 DLT1YMR126C 1029 nt2.71□□□□□ -1.98
CDC40P40968 TIF34YMR146C 1044 nt2.71□□□□□ -1.98
CDC40P40968 YMR306C-AYMR306C-A 390 nt2.71□□□□□ -1.98
CDC40P40968 THI80YOR143C 960 nt2.71□□□□□ -1.98
CDC40P40968 CCL1YPR025C 1182 nt2.71□□□□□ -1.98
CDC40P40968 AIM4YBR194W 372 nt2.71□□□□□ -1.98
CDC40P40968 VHR2YER064C 1518 nt2.71□□□□□ -1.98
CDC40P40968 PEX6YNL329C 3093 nt2.7□□□□□ -1.98
CDC40P40968 TAO3YIL129C 7131 nt2.7□□□□□ -1.98
CDC40P40968 PSK1YAL017W 4071 nt2.7□□□□□ -1.98
CDC40P40968 MIX14YDR031W 366 nt2.7□□□□□ -1.98
CDC40P40968 IES6YEL044W 501 nt2.7□□□□□ -1.98
CDC40P40968 YEL074WYEL074W 339 nt2.7□□□□□ -1.98
CDC40P40968 YER066C-AYER066C-A 501 nt2.7□□□□□ -1.98
CDC40P40968 YJL169WYJL169W 369 nt2.7□□□□□ -1.98
CDC40P40968 INP1YMR204C 1263 nt2.7□□□□□ -1.98
CDC40P40968 TIR2YOR010C 756 nt2.7□□□□□ -1.98
CDC40P40968 RPL20BYOR312C 519 nt2.7□□□□□ -1.98
CDC40P40968 YBR137WYBR137W 540 nt2.7□□□□□ -1.98
CDC40P40968 PSY2YNL201C 2577 nt2.7□□□□□ -1.98
CDC40P40968 SMC2YFR031C 3513 nt2.7□□□□□ -1.98
CDC40P40968 DSE4YNR067C 3354 nt2.7□□□□□ -1.98
CDC40P40968 STN1YDR082W 1485 nt2.7□□□□□ -1.98
CDC40P40968 SAD1YFR005C 1347 nt2.69□□□□□ -1.98
CDC40P40968 UBC9YDL064W 474 nt2.69□□□□□ -1.98
CDC40P40968 RPL13AYDL082W 600 nt2.69□□□□□ -1.98
CDC40P40968 SEM1YDR363W-A 270 nt2.69□□□□□ -1.98
CDC40P40968 YIL054WYIL054W 318 nt2.69□□□□□ -1.98
CDC40P40968 BOS1YLR078C 735 nt2.69□□□□□ -1.98
CDC40P40968 CDC123YLR215C 1083 nt2.69□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms